STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_00341Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
CBER1_08927
Uncharacterized protein.
  
 
 0.967
CBER1_06238
Uncharacterized protein.
    
 
 0.958
CBER1_05435
Uncharacterized protein.
    
 
 0.952
CBER1_00925
Uncharacterized protein.
    
 
 0.860
CBER1_10734
Uncharacterized protein.
    
 
 0.799
CBER1_04685
Uncharacterized protein.
   
 
 0.716
CBER1_09360
B30.2/SPRY domain-containing protein.
   
 
 0.716
CBER1_00130
Uncharacterized protein.
   
 
 0.716
CBER1_05662
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
   
 
 0.673
CBER1_09646
Uncharacterized protein.
    
 
 0.601
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.