STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_03291GMC_OxRdtase_N domain-containing protein. (666 aa)    
Predicted Functional Partners:
CBER1_07133
GMC_OxRdtase_N domain-containing protein.
  
  
 
0.668
CBER1_09828
GMC_OxRdtase_N domain-containing protein.
  
  
 
0.666
CBER1_09479
DOC domain-containing protein.
    
 0.537
CBER1_11838
SGL domain-containing protein.
   
 
 0.479
CBER1_06151
2Fe-2S ferredoxin-type domain-containing protein.
     
 0.463
CBER1_04843
Uncharacterized protein.
    
 0.432
CBER1_07687
Uncharacterized protein.
    
  0.417
CBER1_09866
WD_REPEATS_REGION domain-containing protein.
    
  0.417
CBER1_09436
WD_REPEATS_REGION domain-containing protein.
    
  0.417
CBER1_10711
F-box domain-containing protein.
    
  0.417
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.