STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_01041Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
CBER1_07721
Cytochrome b5 heme-binding domain-containing protein.
     
 0.734
CBER1_07269
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.611
CBER1_00426
Uncharacterized protein.
  
  0.469
CBER1_10203
SCP2 domain-containing protein.
  
  0.469
CBER1_10907
Uncharacterized protein.
  
  0.469
CBER1_02191
Carrier domain-containing protein.
    
  0.438
CBER1_07830
Carrier domain-containing protein.
    
  0.438
CBER1_08656
Carrier domain-containing protein.
    
  0.438
CBER1_10385
Carrier domain-containing protein.
    
  0.438
CBER1_10722
Uncharacterized protein.
    
  0.438
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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