STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_06137Protein kinase domain-containing protein. (190 aa)    
Predicted Functional Partners:
CBER1_07476
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.816
CBER1_02407
Response regulatory domain-containing protein.
    
 0.755
CBER1_02737
RING-type domain-containing protein.
    
 0.738
CBER1_06260
Uncharacterized protein.
    
 0.732
CBER1_02319
Uncharacterized protein.
    
  0.720
CBER1_09351
SH3 domain-containing protein.
    
 0.716
CBER1_10345
MHYT domain-containing protein.
    
 0.708
CBER1_03340
Uncharacterized protein.
    
 0.699
CBER1_00926
But2 domain-containing protein.
    
 0.696
CBER1_02696
Uncharacterized protein.
    
 0.696
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.