STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_05697Uncharacterized protein. (620 aa)    
Predicted Functional Partners:
CBER1_02086
Uncharacterized protein.
    
   0.754
CBER1_10227
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.713
CBER1_01516
Uncharacterized protein.
    
   0.697
CBER1_00912
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.671
CBER1_05015
Nsp1_C domain-containing protein.
     
 0.654
CBER1_06577
Uncharacterized protein.
     
 0.654
CBER1_01163
Uncharacterized protein.
    
  0.646
CBER1_07476
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.624
CBER1_00262
Uncharacterized protein.
    
  0.609
CBER1_02163
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
  0.594
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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