STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_02711OBG-type G domain-containing protein. (367 aa)    
Predicted Functional Partners:
CBER1_01822
Uncharacterized protein.
   
 
 0.994
CBER1_01606
RWD domain-containing protein.
   
 
 0.948
CBER1_01263
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.869
CBER1_06361
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
   0.861
CBER1_07956
Ribosomal_L2_C domain-containing protein.
   
 
 0.859
CBER1_06920
Ribosomal_L23eN domain-containing protein.
   
   0.859
CBER1_10296
Uncharacterized protein.
   
   0.852
CBER1_04707
DNA_pol_E_B domain-containing protein.
    
   0.830
CBER1_00613
Uncharacterized protein.
    
   0.830
CBER1_02086
Uncharacterized protein.
   
 
 0.826
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.