STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_00751GOLD domain-containing protein. (212 aa)    
Predicted Functional Partners:
CBER1_06715
GOLD domain-containing protein.
   
0.999
CBER1_08152
GOLD domain-containing protein.
  
0.993
CBER1_05992
GOLD domain-containing protein.
   
0.972
CBER1_05910
Uncharacterized protein.
   
 0.962
CBER1_11506
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.867
CBER1_00894
Uncharacterized protein.
   
 0.845
CBER1_11939
Uncharacterized protein.
   
 0.845
CBER1_00726
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.833
CBER1_07499
Uncharacterized protein.
   
 0.824
CBER1_10642
Uncharacterized protein.
    
 0.822
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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