STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_09501Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (750 aa)    
Predicted Functional Partners:
CBER1_08129
UBA domain-containing protein.
   
 0.795
CBER1_07955
BAR domain-containing protein.
    
 0.767
CBER1_01754
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.741
CBER1_04396
Uncharacterized protein.
    
 0.699
CBER1_05305
ANK_REP_REGION domain-containing protein.
   
 0.699
CBER1_05072
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.696
CBER1_04867
Uncharacterized protein.
    
 0.690
CBER1_09512
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.658
CBER1_11414
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.644
CBER1_05104
AP-1 complex subunit gamma.
    
 0.644
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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