STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_08667Uncharacterized protein. (633 aa)    
Predicted Functional Partners:
CBER1_10334
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 0.982
CBER1_09163
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.949
CBER1_01021
PX domain-containing protein.
    
 
 0.929
CBER1_00279
Uncharacterized protein.
    
 
 0.897
CBER1_01185
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.774
CBER1_01754
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.687
CBER1_01224
Uncharacterized protein.
    
 0.685
CBER1_04396
Uncharacterized protein.
    
  0.677
CBER1_06625
Uncharacterized protein.
    
 
 0.640
CBER1_00384
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.625
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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