STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_04414Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
CBER1_06591
Ubiquitin-like domain-containing protein.
   
    0.870
CBER1_02603
Uncharacterized protein.
   
    0.849
CBER1_11469
PC4 domain-containing protein.
   
    0.782
CBER1_04828
Small nuclear ribonucleoprotein G.
   
    0.775
CBER1_03443
Uncharacterized protein.
   
    0.768
CBER1_03035
Uncharacterized protein.
   
    0.682
CBER1_04200
Uncharacterized protein.
   
  
 0.522
CBER1_07971
Uncharacterized protein.
   
    0.519
CBER1_10463
Sm domain-containing protein.
   
  
 0.495
CBER1_11175
Uncharacterized protein.
   
    0.454
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.