STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_04807Mannan endo-1,6-alpha-mannosidase. (451 aa)    
Predicted Functional Partners:
CBER1_09145
Uncharacterized protein.
    
 0.791
CBER1_00952
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.781
CBER1_10636
Uncharacterized protein.
  
 
   0.566
CBER1_11435
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.520
CBER1_11589
Uncharacterized protein.
    
  0.516
CBER1_01651
Protein kinase domain-containing protein.
    
 
 0.465
CBER1_07211
TRP_N domain-containing protein.
  
     0.452
CBER1_06410
DMAP-interaction domain-containing protein.
  
  
  0.432
CBER1_01360
ATG11 domain-containing protein.
    
 
 0.412
CBER1_10053
Uncharacterized protein.
  
     0.411
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.