STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_02553Amidase domain-containing protein. (641 aa)    
Predicted Functional Partners:
CBER1_09713
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 0.877
CBER1_01129
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.786
CBER1_01481
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.627
CBER1_03358
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.602
CBER1_07787
Uncharacterized protein.
  
 0.602
CBER1_07931
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.602
CBER1_07599
Uncharacterized protein.
   
 
 0.600
CBER1_02934
Uncharacterized protein.
  
 
 0.575
CBER1_00256
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.575
CBER1_11212
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.574
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.