STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_11392Uncharacterized protein. (581 aa)    
Predicted Functional Partners:
CBER1_07687
Uncharacterized protein.
  
 
  0.599
CBER1_00705
Uncharacterized protein.
  
 
  0.520
CBER1_05305
ANK_REP_REGION domain-containing protein.
   
  0.516
CBER1_00451
Uncharacterized protein.
  
 
 
 0.461
CBER1_01823
Uncharacterized protein.
  
 
  0.456
CBER1_05862
Uncharacterized protein.
  
 
  0.455
CBER1_04473
Uncharacterized protein.
    
  0.454
CBER1_11137
Uncharacterized protein.
    
  0.454
CBER1_00051
Uncharacterized protein.
  
 
  0.451
CBER1_01115
ANK_REP_REGION domain-containing protein.
  
  0.446
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.