STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_03016MutL_C domain-containing protein. (1114 aa)    
Predicted Functional Partners:
CBER1_11861
DNA_mis_repair domain-containing protein.
    
 0.993
CBER1_06594
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.927
CBER1_09915
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.890
CBER1_10422
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.890
CBER1_08386
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.890
CBER1_08330
Zn(2)-C6 fungal-type domain-containing protein.
  
 0.869
CBER1_02021
Uncharacterized protein.
    
   0.859
CBER1_00195
Uncharacterized protein; Belongs to the AAA ATPase family.
    
   0.837
CBER1_07142
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.836
CBER1_05347
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.836
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.