STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_02461Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (625 aa)    
Predicted Functional Partners:
CBER1_06149
ATP-grasp domain-containing protein.
 0.998
CBER1_01567
Glutamine amidotransferase type-2 domain-containing protein.
 
 0.991
CBER1_03581
SAICAR_synt domain-containing protein.
   
 
 0.985
CBER1_06910
Glutamine amidotransferase type-1 domain-containing protein.
  
 0.985
CBER1_09668
Formyl_trans_N domain-containing protein.
  
 0.964
CBER1_07002
MGS domain-containing protein.
 
 0.963
CBER1_07825
ACT domain-containing protein.
  
 0.954
CBER1_11254
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.954
CBER1_08663
ADSL_C domain-containing protein.
  
 0.954
CBER1_05584
ADSL_C domain-containing protein.
  
 0.954
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.