STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_04350Uncharacterized protein. (521 aa)    
Predicted Functional Partners:
CBER1_07913
Matrin-type domain-containing protein.
   
 0.998
CBER1_02751
Matrin-type domain-containing protein.
   
 0.997
CBER1_06451
Uncharacterized protein.
   
 0.996
CBER1_09007
Uncharacterized protein.
   
 0.996
CBER1_01320
Uncharacterized protein.
   
 0.996
CBER1_06397
PSP domain-containing protein.
   
 0.994
CBER1_03325
CPSF_A domain-containing protein.
   
 0.993
CBER1_01996
SF3b1 domain-containing protein.
   
 0.993
CBER1_05592
Uncharacterized protein.
   
 
 0.991
CBER1_01746
Sm domain-containing protein.
   
 0.991
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.