STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBER1_10815Uncharacterized protein. (140 aa)    
Predicted Functional Partners:
CBER1_03511
Tr-type G domain-containing protein.
    
 0.679
CBER1_03085
ACT domain-containing protein.
    
  0.643
CBER1_01335
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.630
CBER1_11320
Threonine dehydratase.
  
 0.548
CBER1_11614
Uncharacterized protein.
  
 0.548
CBER1_09037
PALP domain-containing protein.
  
 0.548
CBER1_04969
PALP domain-containing protein.
  
 0.548
CBER1_04667
PALP domain-containing protein.
  
 0.537
CBER1_07962
Uncharacterized protein.
  
 0.537
CBER1_08137
Chorismate synthase.
    
  0.531
Your Current Organism:
Cercospora berteroae
NCBI taxonomy Id: 357750
Other names: C. berteroae
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