CBER1_10287 protein (Cercospora berteroae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CBER1_10287

Uncharacterized protein. (320 aa)

Predicted Functional Partners:

CBER1_02001

0.965

CBER1_02343

0.879

CBER1_04026

0.848

CBER1_06100

0.844

CBER1_05173

0.840

CBER1_00985

0.828

CBER1_02733

0.802

CBER1_02999

0.796

CBER1_05059

0.759

CBER1_06702

0.754

Your Current Organism:

Cercospora berteroae

NCBI taxonomy Id: 357750
Other names: C. berteroae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBER1_00985	CBER1_02001	A0A2S6C0P2	A0A2S6CMS3	CAP-Gly domain-containing protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.968
CBER1_00985	CBER1_02343	A0A2S6C0P2	A0A2S6CM09	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.999
CBER1_00985	CBER1_02733	A0A2S6C0P2	A0A2S6C6N1	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.986
CBER1_00985	CBER1_02999	A0A2S6C0P2	A0A2S6C2S8	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.986
CBER1_00985	CBER1_04026	A0A2S6C0P2	A0A2S6C506	CAP-Gly domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.990
CBER1_00985	CBER1_05059	A0A2S6C0P2	A0A2S6BRF6	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.954
CBER1_00985	CBER1_05173	A0A2S6C0P2	A0A2S6BRR9	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.992
CBER1_00985	CBER1_06702	A0A2S6C0P2	A0A2S6CNC9	CAP-Gly domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.957
CBER1_00985	CBER1_10287	A0A2S6C0P2	A0A2S6CN82	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.828
CBER1_02001	CBER1_00985	A0A2S6CMS3	A0A2S6C0P2	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	CAP-Gly domain-containing protein.	0.968
CBER1_02001	CBER1_02343	A0A2S6CMS3	A0A2S6CM09	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.973
CBER1_02001	CBER1_02733	A0A2S6CMS3	A0A2S6C6N1	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.960
CBER1_02001	CBER1_02999	A0A2S6CMS3	A0A2S6C2S8	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.968
CBER1_02001	CBER1_04026	A0A2S6CMS3	A0A2S6C506	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein; Belongs to the actin family.	0.971
CBER1_02001	CBER1_05059	A0A2S6CMS3	A0A2S6BRF6	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.961
CBER1_02001	CBER1_05173	A0A2S6CMS3	A0A2S6BRR9	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.971
CBER1_02001	CBER1_06100	A0A2S6CMS3	A0A2S6C5E5	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	PH domain-containing protein.	0.964
CBER1_02001	CBER1_06702	A0A2S6CMS3	A0A2S6CNC9	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein; Belongs to the actin family.	0.952
CBER1_02001	CBER1_10287	A0A2S6CMS3	A0A2S6CN82	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.965
CBER1_02343	CBER1_00985	A0A2S6CM09	A0A2S6C0P2	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.999