Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBER1_02452 | CBER1_02890 | A0A2S6CI90 | A0A2S6BQG8 | Uncharacterized protein. | SRP9-21 domain-containing protein. | 0.999 |
CBER1_02452 | CBER1_03286 | A0A2S6CI90 | A0A2S6C290 | Uncharacterized protein. | Ribosomal_L19e domain-containing protein. | 0.890 |
CBER1_02452 | CBER1_05982 | A0A2S6CI90 | A0A2S6C4N0 | Uncharacterized protein. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.999 |
CBER1_02452 | CBER1_06626 | A0A2S6CI90 | A0A2S6C4C7 | Uncharacterized protein. | Uncharacterized protein. | 0.904 |
CBER1_02452 | CBER1_06920 | A0A2S6CI90 | A0A2S6CI20 | Uncharacterized protein. | Ribosomal_L23eN domain-containing protein. | 0.888 |
CBER1_02452 | CBER1_07295 | A0A2S6CI90 | A0A2S6CEX3 | Uncharacterized protein. | SRP54 domain-containing protein. | 0.910 |
CBER1_02452 | CBER1_09056 | A0A2S6CI90 | A0A2S6BWL9 | Uncharacterized protein. | Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. | 0.999 |
CBER1_02452 | CBER1_09386 | A0A2S6CI90 | A0A2S6C902 | Uncharacterized protein. | Uncharacterized protein. | 0.922 |
CBER1_02452 | CBER1_09471 | A0A2S6CI90 | A0A2S6CNT6 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
CBER1_02452 | CBER1_11910 | A0A2S6CI90 | A0A2S6C0C6 | Uncharacterized protein. | Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. | 0.999 |
CBER1_02890 | CBER1_02452 | A0A2S6BQG8 | A0A2S6CI90 | SRP9-21 domain-containing protein. | Uncharacterized protein. | 0.999 |
CBER1_02890 | CBER1_03286 | A0A2S6BQG8 | A0A2S6C290 | SRP9-21 domain-containing protein. | Ribosomal_L19e domain-containing protein. | 0.899 |
CBER1_02890 | CBER1_05982 | A0A2S6BQG8 | A0A2S6C4N0 | SRP9-21 domain-containing protein. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.999 |
CBER1_02890 | CBER1_06626 | A0A2S6BQG8 | A0A2S6C4C7 | SRP9-21 domain-containing protein. | Uncharacterized protein. | 0.886 |
CBER1_02890 | CBER1_06920 | A0A2S6BQG8 | A0A2S6CI20 | SRP9-21 domain-containing protein. | Ribosomal_L23eN domain-containing protein. | 0.901 |
CBER1_02890 | CBER1_07295 | A0A2S6BQG8 | A0A2S6CEX3 | SRP9-21 domain-containing protein. | SRP54 domain-containing protein. | 0.922 |
CBER1_02890 | CBER1_09056 | A0A2S6BQG8 | A0A2S6BWL9 | SRP9-21 domain-containing protein. | Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. | 0.999 |
CBER1_02890 | CBER1_09386 | A0A2S6BQG8 | A0A2S6C902 | SRP9-21 domain-containing protein. | Uncharacterized protein. | 0.898 |
CBER1_02890 | CBER1_09471 | A0A2S6BQG8 | A0A2S6CNT6 | SRP9-21 domain-containing protein. | Uncharacterized protein. | 0.999 |
CBER1_02890 | CBER1_11910 | A0A2S6BQG8 | A0A2S6C0C6 | SRP9-21 domain-containing protein. | Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. | 0.999 |
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