STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0002Transposase-like protein; KEGG: vvy:VV3211 transposase and inactivated derivative. (161 aa)    
Predicted Functional Partners:
Ping_0001
KEGG: ppr:PBPRB1782 putative transposase.
     0.946
Ping_1344
KEGG: ppr:PBPRB1782 putative transposase.
 
    0.776
Ping_1361
KEGG: ppr:PBPRB1782 putative transposase.
 
    0.776
Ping_1511
KEGG: ppr:PBPRB1782 putative transposase.
 
    0.776
Ping_3195
KEGG: ppr:PBPRB1782 putative transposase.
 
    0.776
Ping_3681
KEGG: son:SO2875 ISSod10, transposase OrfB.
 
    0.776
Ping_2700
KEGG: ppr:PBPRB1782 putative transposase.
 
     0.775
Ping_0794
Hypothetical protein; KEGG: son:SOA0162 ISSod6, transposase.
  
    0.556
Ping_0302
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: shm:Shewmr7_3944 transcriptional regulator, XRE family.
  
     0.491
Ping_1552
PFAM: transposase, IS4 family protein; KEGG: son:SOA0162 ISSod6, transposase.
  
    0.487
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.