STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0023PFAM: Rhs element Vgr protein; KEGG: bma:BMAA0737 rhs element Vgr protein. (1041 aa)    
Predicted Functional Partners:
Ping_0018
KEGG: pst:PSPTO_2544 hypothetical protein.
 
  
 0.952
Ping_0017
KEGG: gme:Gmet_0274 hypothetical protein.
 
  
 0.943
Ping_0024
PFAM: pentapeptide repeat protein; KEGG: bbr:BB0795 hypothetical protein.
 
  
 0.943
Ping_0021
PFAM: protein of unknown function DUF879; KEGG: gme:Gmet_3313 protein of unknown function DUF879.
 
  
 0.941
Ping_0015
PFAM: protein of unknown function DUF876; KEGG: gme:Gmet_3311 protein of unknown function DUF876.
 
  
 0.934
Ping_0022
PFAM: protein of unknown function DUF1305; KEGG: bte:BTH_II0865 protein of unknown function (DUF1305) superfamily.
 
  
 0.934
Ping_0016
KEGG: bte:BTH_II0856 hypothetical protein.
 
  
 0.931
Ping_0028
Rhs element Vgr protein; PFAM: Carbohydrate-binding family V/XII; Rhs element Vgr protein; KEGG: bma:BMAA0737 rhs element Vgr protein.
 
  
 
0.931
Ping_0019
PFAM: protein of unknown function DUF796; KEGG: bte:BTH_II0868 hcp protein.
 
  
 0.930
Ping_0012
PFAM: protein of unknown function DUF877; KEGG: pen:PSEEN0524 hypothetical protein.
 
  
 0.917
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.