STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0032KEGG: bpa:BPP0711 hypothetical protein. (136 aa)    
Predicted Functional Partners:
Ping_0031
KEGG: bps:BPSS0184 hypothetical protein.
       0.773
Ping_0029
PFAM: pentapeptide repeat protein; KEGG: bbr:BB0795 hypothetical protein.
  
  
 0.703
Ping_0030
PFAM: pentapeptide repeat protein; KEGG: bpm:BURPS1710b_A0543 hypothetical protein.
       0.643
Ping_0033
Putative sensor with HAMP domain; PFAM: histidine kinase, HAMP region domain protein; KEGG: ret:RHE_CH02648 putative transcriptional regulator protein.
       0.613
Ping_0034
Hypothetical protein.
       0.613
Ping_0028
Rhs element Vgr protein; PFAM: Carbohydrate-binding family V/XII; Rhs element Vgr protein; KEGG: bma:BMAA0737 rhs element Vgr protein.
     
 0.612
Ping_0024
PFAM: pentapeptide repeat protein; KEGG: bbr:BB0795 hypothetical protein.
  
  
 0.416
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.