STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0035PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB1643 putative inner membrane transport protein. (808 aa)    
Predicted Functional Partners:
Ping_0037
KEGG: hch:HCH_03644 ABC-type uncharacterized transport system, periplasmic component.
 
    0.789
Ping_3331
KEGG: hch:HCH_03644 ABC-type uncharacterized transport system, periplasmic component.
 
    0.786
Ping_3330
KEGG: hch:HCH_03645 ABC-type uncharacterized transport system, periplasmic component.
 
    0.785
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
    0.760
Ping_0033
Putative sensor with HAMP domain; PFAM: histidine kinase, HAMP region domain protein; KEGG: ret:RHE_CH02648 putative transcriptional regulator protein.
 
     0.519
Ping_0034
Hypothetical protein.
       0.420
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.