STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauBABC transporter for nitrate/sulfonate/bicarbonate ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (279 aa)    
Predicted Functional Partners:
Ping_0047
KEGG: bxe:Bxe_B0694 ABC taurine transporter, periplasmic ligand binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3.
 
 0.999
Ping_0049
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0692 ABC taurine transporter, inner membrane subunit.
 
 0.999
Ping_2376
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VPA0134 ABC transporter permease protein.
  
 0.910
Ping_3709
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: dar:Daro_3463 protein of unknown function DUF214.
 
      0.877
Ping_3708
ABC transporter permease protein; PFAM: protein of unknown function DUF214; KEGG: eba:ebA4058 putative ABC transporter protein.
 
      0.844
Ping_2165
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.820
Ping_0046
PFAM: regulatory protein GntR, HTH; KEGG: csa:Csal_0157 transcriptional regulator, GntR family.
 
     0.671
Ping_1426
ABC transporter for copper ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRB0849 hypothetical NosF protein.
 
     
0.642
Ping_0051
PFAM: aminotransferase class-III; KEGG: rde:RD1_0981 taurine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.514
Ping_0050
PFAM: protein of unknown function DUF81; KEGG: csa:Csal_0160 protein of unknown function DUF81.
 
     0.477
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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