node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ping_0074 | Ping_0076 | Ping_0074 | Ping_0076 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | 0.763 |
Ping_0074 | Ping_0077 | Ping_0074 | Ping_0077 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | PFAM: Peptidoglycan-binding LysM; KEGG: sfr:Sfri_0025 peptidoglycan-binding LysM. | 0.489 |
Ping_0074 | Ping_3391 | Ping_0074 | Ping_3391 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.544 |
Ping_0074 | aroE | Ping_0074 | Ping_0071 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.500 |
Ping_0074 | fmt | Ping_0074 | Ping_0079 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.427 |
Ping_0074 | polA | Ping_0074 | Ping_3185 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | Fused DNA polymerase 5'->3' exonuclease and 3'->5' polymerase and 3'->5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.434 |
Ping_0074 | purE | Ping_0074 | Ping_0073 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.634 |
Ping_0074 | smg | Ping_0074 | Ping_0075 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | PFAM: protein of unknown function DUF494; KEGG: ilo:IL0020 hypothetical protein; Belongs to the Smg family. | 0.840 |
Ping_0074 | topB | Ping_0074 | Ping_2461 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...] | 0.859 |
Ping_0074 | tsaC | Ping_0074 | Ping_0072 | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate. | 0.863 |
Ping_0076 | Ping_0074 | Ping_0076 | Ping_0074 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | 0.763 |
Ping_0076 | Ping_0077 | Ping_0076 | Ping_0077 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | PFAM: Peptidoglycan-binding LysM; KEGG: sfr:Sfri_0025 peptidoglycan-binding LysM. | 0.561 |
Ping_0076 | Ping_3391 | Ping_0076 | Ping_3391 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.631 |
Ping_0076 | aroE | Ping_0076 | Ping_0071 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.448 |
Ping_0076 | fmt | Ping_0076 | Ping_0079 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.474 |
Ping_0076 | purE | Ping_0076 | Ping_0073 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.539 |
Ping_0076 | smg | Ping_0076 | Ping_0075 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | PFAM: protein of unknown function DUF494; KEGG: ilo:IL0020 hypothetical protein; Belongs to the Smg family. | 0.854 |
Ping_0076 | tsaC | Ping_0076 | Ping_0072 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate. | 0.822 |
Ping_0077 | Ping_0074 | Ping_0077 | Ping_0074 | PFAM: Peptidoglycan-binding LysM; KEGG: sfr:Sfri_0025 peptidoglycan-binding LysM. | PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: pha:PSHAa0027 DNA topoisomerase. | 0.489 |
Ping_0077 | Ping_0076 | Ping_0077 | Ping_0076 | PFAM: Peptidoglycan-binding LysM; KEGG: sfr:Sfri_0025 peptidoglycan-binding LysM. | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: pat:Patl_0025 DNA protecting protein DprA. | 0.561 |