STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0109PFAM: electron transport protein SCO1/SenC; KEGG: pat:Patl_4237 electron transport protein SCO1/SenC. (212 aa)    
Predicted Functional Partners:
Ping_2717
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.926
Ping_2293
PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: son:SO2100 thioredoxin family protein.
 
 
 0.910
Ping_3018
TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: vch:VC2051 thiol:disulfide interchange protein DsbE.
 
 
 0.836
Ping_3432
Periplasmic protein conserved in bacteria with c-terminal histidine; PFAM: protein of unknown function DUF461; KEGG: tcx:Tcr_1566 protein of unknown function DUF461.
 
   
 0.828
Ping_3706
PFAM: Thioredoxin domain; KEGG: ilo:IL2069 thioredoxin related protein.
  
 
 0.799
Ping_2715
PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: pha:PSHAa2870 cytochrome c oxidase assembly protein CoxG.
 
 
 0.754
Ping_2711
PFAM: cytochrome oxidase assembly; KEGG: pha:PSHAa2866 cytochrome oxidase assembly protein.
 
 
 0.696
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit PetA; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
   
 0.657
Ping_2872
PFAM: cytochrome c1; KEGG: vfi:VF2217 cytochrome C1.
 
   
 0.651
Ping_0210
PFAM: cytochrome c, class I; KEGG: vvy:VV0188 cytochrome c4.
 
   
 0.586
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.