STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAD-mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family. (394 aa)    
Predicted Functional Partners:
Ping_0132
Fructuronate reductase; PFAM: Mannitol dehydrogenase, C-terminal domain; Mannitol dehydrogenase rossman, N-terminal domain; KEGG: ppr:PBPRB1880 putative mannonate oxidoreductase.
 
 0.994
uxaC
PFAM: Glucuronate isomerase; KEGG: vvy:VVA1594 glucuronate isomerase.
 
  
 0.970
Ping_0130
2-keto-3-deoxygluconate kinase; PFAM: PfkB domain protein; KEGG: ppr:PBPRB1882 hypothetical carbohydrate kinase.
 
  
 0.938
Ping_3554
TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: cac:CAC0726 ribose 5-phosphate isomerase RpiB.
   
 
  0.816
Ping_0167
PFAM: ribulose-phosphate 3-epimerase; thiamine monophosphate synthase; KEGG: sfr:Sfri_0381 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
  0.800
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
  0.800
Ping_2752
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
  0.800
Ping_2937
6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
  0.800
Ping_0135
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vpa:VPA1702 putative dicarboxylate-binding periplasmic protein.
 
   
 0.668
dctQ-4
PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ppr:PBPRB1878 putative small integral C4-dicarboxylate membrane transport protein.
 
     0.617
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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