STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0170PFAM: cytochrome c, class I; KEGG: vpa:VP0042 cytochrome c5. (145 aa)    
Predicted Functional Partners:
Ping_2872
PFAM: cytochrome c1; KEGG: vfi:VF2217 cytochrome C1.
 
  
 0.798
Ping_0210
PFAM: cytochrome c, class I; KEGG: vvy:VV0188 cytochrome c4.
 
   
 0.796
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit PetA; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.733
Ping_1310
Diheme-containing protein c4; KEGG: vpa:VP2015 putative cytochrome c.
 
   
 0.718
Ping_0391
PFAM: cytochrome c, class I; KEGG: vfi:VF1943 cytochrome c-554(548).
 
   
 0.695
Ping_2711
PFAM: cytochrome oxidase assembly; KEGG: pha:PSHAa2866 cytochrome oxidase assembly protein.
 
     0.677
Ping_3044
KEGG: vfi:VF0426 hypothetical protein.
  
     0.658
Ping_0398
PFAM: RDD domain containing protein; KEGG: ppr:PBPRA0490 hypothetical protein.
  
     0.653
Ping_0935
KEGG: vch:VC1438 hypothetical protein.
  
     0.629
Ping_0936
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.585
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.