STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0182PFAM: adenylate cyclase; KEGG: vvy:VV0577 hypothetical protein. (502 aa)    
Predicted Functional Partners:
Ping_3310
PFAM: protein of unknown function DUF412; KEGG: yps:YPTB2595 hypothetical protein.
  
     0.667
Ping_2362
PFAM: protein of unknown function DUF1315; KEGG: ilo:IL1270 hypothetical protein.
  
     0.627
Ping_1617
PFAM: phage shock B family protein; KEGG: ppr:PBPRA2438 phage shock protein B.
  
     0.609
Ping_0181
PFAM: protein of unknown function DUF47; KEGG: sfr:Sfri_0565 protein of unknown function DUF47.
       0.569
Ping_0180
PFAM: phosphate transporter; KEGG: pat:Patl_3319 phosphate transporter.
       0.550
syd
Syd family protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.
  
     0.539
Ping_3737
PFAM: ATP synthase I chain; KEGG: ilo:IL2626 F0F1-type ATP synthase, subunit I.
  
     0.530
rraB
Hypothetical protein DUF1260; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.
  
     0.517
Ping_0930
PFAM: UspA domain protein; KEGG: ppr:PBPRA1839 putative universal stress protein family.
  
     0.515
Ping_0208
KEGG: pha:PSHAa2750 hypothetical protein.
  
     0.501
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.