STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
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[Homology]
Score
Ping_0193Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (118 aa)    
Predicted Functional Partners:
Ping_2971
PFAM: phosphatidate cytidylyltransferase; KEGG: ppr:PBPRA2963 putative phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.913
Ping_0863
KEGG: eca:ECA0346 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.901
Ping_3072
1-acyl-glycerol-3-phosphate acyltransferase PlsC; PFAM: phospholipid/glycerol acyltransferase; KEGG: tdn:Tmden_0310 phospholipid/glycerol acyltransferase.
     
 0.901
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: son:SO0053 glycerol-3-phosphate dehydrogenase (NAD(P)+).
     
 0.822
Ping_3232
PFAM: FAD dependent oxidoreductase; KEGG: pat:Patl_3682 FAD dependent oxidoreductase.
    
  0.800
lexA
SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
    
 0.743
Ping_0194
PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3788 glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family.
     
 0.686
ybeY
Hypothetical protein UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.624
Ping_1454
phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase; PFAM: sulfatase; protein of unknown function DUF1705; KEGG: vfi:VFA0210 integral membrane protein.
 
   
 0.597
dnaB
Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
       0.515
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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