STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0201KEGG: eca:ECA2660 predicted ATP-dependent endonuclease of the OLD family. (558 aa)    
Predicted Functional Partners:
Ping_2955
PFAM: protein of unknown function DUF1100, hydrolase family protein; KEGG: ppr:PBPRA0837 conserved hypothetical protein; Belongs to the UPF0255 family.
  
     0.613
Ping_1897
PFAM: restriction modification system DNA specificity domain; KEGG: ecs:ECs5306 type I restriction-modification enzyme S subunit.
  
    0.612
Ping_0149
PFAM: restriction modification system DNA specificity domain; KEGG: mma:MM3142 type I restriction-modification system specificity subunit.
  
    0.608
Ping_2547
PFAM: major facilitator superfamily MFS_1; KEGG: vvu:VV21453 permease of the major facilitator superfamily.
  
     0.448
Ping_0960
PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: yps:YPTB1059 hypothetical protein.
  
     0.418
Ping_1828
PFAM: permease; KEGG: cps:CPS_3357 putative permease.
   
    0.418
Ping_0200
Hypothetical protein.
       0.408
Ping_0715
KEGG: eca:ECA1027 hypothetical protein; Belongs to the UPF0325 family.
  
     0.408
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.