STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0233KEGG: shm:Shewmr7_0037 carbonic anhydrase, family 3. (179 aa)    
Predicted Functional Partners:
Ping_0390
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: pst:PSPTO_0994 carbonic anhydrase.
    
 
 0.617
Ping_1529
PFAM: carbonic anhydrase; KEGG: noc:Noc_1341 carbonic anhydrase.
    
 
 0.604
Ping_1488
KEGG: vch:VC1498 GAF domain-containing protein.
      0.507
Ping_3532
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppr:PBPRB0596 putative glyoxylase I family protein.
 
    0.466
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.