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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0238PFAM: protein of unknown function DUF511; KEGG: rso:RSc0886 hypothetical protein. (312 aa)    
Predicted Functional Partners:
Ping_0149
PFAM: restriction modification system DNA specificity domain; KEGG: mma:MM3142 type I restriction-modification system specificity subunit.
  
    0.669
Ping_1897
PFAM: restriction modification system DNA specificity domain; KEGG: ecs:ECs5306 type I restriction-modification enzyme S subunit.
  
    0.606
Ping_0237
Hypothetical protein.
       0.550
Ping_1820
KEGG: neu:NE2041 hypothetical protein.
  
     0.537
Ping_0239
Hypothetical protein.
       0.486
Ping_2246
KEGG: vfi:VFA0558 coproporphyrinogen III oxidase.
  
     0.469
Ping_2152
PFAM: GTP-binding protein, HSR1-related; KEGG: ppr:PBPRA1571 hypothetical protein.
  
     0.451
Ping_2153
Kinase; KEGG: ppr:PBPRA1570 hypothetical protein.
  
     0.433
Ping_2404
PFAM: metal-dependent protein hydrolase; KEGG: cps:CPS_2163 hypothetical protein.
  
     0.420
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.