STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0254PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: par:Psyc_0419 hypothetical protein. (230 aa)    
Predicted Functional Partners:
Ping_0255
PFAM: FAD dependent oxidoreductase; KEGG: par:Psyc_0420 hypothetical protein.
 
  
 0.954
Ping_0256
PFAM: chalcone and stilbene synthases domain protein; Chalcone and stilbene synthases domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal domain protein; KEGG: par:Psyc_0421 possible chalcone synthase.
 
    0.811
Ping_1910
KEGG: pcr:Pcryo_0304 hypothetical protein.
   
   0.539
Ping_3395
PFAM: Alternative oxidase; KEGG: vfi:VF0578 alternative oxidase.
   
 0.487
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.