STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0276Ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: pat:Patl_1427 ethanolamine ammonia lyase large subunit. (466 aa)    
Predicted Functional Partners:
Ping_0277
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: pat:Patl_1428 ethanolamine ammonia-lyase; Belongs to the EutC family.
 0.999
Ping_2092
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: vch:VC1554 glycerophosphoryl diester phosphodiesterase, putative.
     
  0.900
Ping_3177
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: ppr:PBPRA1100 putative glycerophosphoryl diester phosphodiesterase.
     
  0.900
Ping_0278
Ethanolamine:proton symporter, EAT family; TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: hch:HCH_06322 amino acid transporters; TC 2.A.3.5.1.
 
  
 0.887
Ping_0275
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: bpm:BURPS1710b_0135 transcriptional regulator, AraC family.
 
   
 0.785
Ping_3315
PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: vch:VC2033 alcohol dehydrogenase/acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.707
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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