Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ping_0281PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: shm:Shewmr7_3909 periplasmic sensor signal transduction histidine kinase. (475 aa)    
Predicted Functional Partners:
Ping_0282
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4647 DNA-binding response regulator.
 0.998
Ping_0484
Multi-sensor histidine kinase with CHASE and PAS/PAC sensory domains; KEGG: neu:NE0049 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.846
Ping_2140
KEGG: pol:Bpro_2468 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 
 0.841
Ping_0924
KEGG: vpa:VP0487 sensor histidine kinase FexB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.817
Ping_2024
KEGG: mag:amb2165 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.727
Ping_0979
Amino acid-binding domain sensor hybrid histidine kinase; PFAM: extracellular solute-binding protein, family 3; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: wsu:WS0850 sensory transduction histidine kinase.
  
 
 0.724
Ping_2782
Pyruvate dehydrogenase complex, E1 beta subunit; PFAM: dehydrogenase, E1 component; Transketolase, central region; Transketolase domain protein; KEGG: bms:BRA0032 acetoin dehydrogenase, alpha/beta subunit, putative.
    
 0.721
Ping_0283
Hypothetical protein; KEGG: sfr:Sfri_1133 propeptide, PepSY amd peptidase M4.
     
 0.712
Ping_1228
Two component transcriptional regulator, winged helix family protein; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: vpa:VP1734 DNA-binding response regulator.
 
 
 0.668
baeR
PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_2868 response regulator receiver:transcriptional regulatory protein, C-terminal.
 
 
 0.642
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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