STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0296PFAM: extracellular solute-binding protein, family 3; KEGG: vpa:VPA0637 arginine ABC transporter, periplasmic arginine-binding protein; TC 3.A.1.3.-; Belongs to the bacterial solute-binding protein 3 family. (260 aa)    
Predicted Functional Partners:
Ping_2431
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB0867 putative amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
   0.892
Ping_2832
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ppr:PBPRA2740 putative ABC-type arginine transport system, permease component; TC 3.A.1.3.-.
 
 0.889
Ping_2430
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA3493 putative amino acid ABC transporter, permease protein; TC 3.A.1.3.-.
   0.882
Ping_2831
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF1585 histidine transport system permease protein HisM; TC 3.A.1.3.-.
  
 0.879
Ping_1919
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VV0007 ABC-type amino acid transport system, permease component; TC 3.A.1.3.-.
   0.870
Ping_0414
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1063 ABC polar amino acid family transporter, inner membrane subunit; TC 3.A.1.3.-.
 
   0.817
Ping_0413
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1062 ABC polar amino acid family transporter, inner membrane subunit; TC 3.A.1.3.-.
 
   0.816
Ping_1515
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_403 probable permease of ABC transporter; TC 3.A.1.3.-.
   0.816
Ping_1516
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_405 probable permease of ABC transporter; TC 3.A.1.3.-.
   0.815
Ping_0412
L-arginine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1463 polar amino acid transport system ATP-binding protein.
   0.809
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.