STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0326PFAM: glycosyltransferase sugar-binding region containing DXD motif; KEGG: vch:VC0234 hypothetical protein. (269 aa)    
Predicted Functional Partners:
Ping_0325
Exopolysaccharide biosynthesis protein-like protein; KEGG: hin:HI1244 hypothetical protein.
       0.773
Ping_3285
TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: sdn:Sden_1383 D,D-heptose 1,7-bisphosphate phosphatase.
      0.712
Ping_0327
PFAM: glycosyl transferase, family 9; KEGG: vch:VC0223 ADP-heptose--LPS heptosyltransferase II, putative.
 
     0.679
Ping_1764
Na+/H+ antiporter; KEGG: noc:Noc_1323 hypothetical protein.
  
     0.539
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.