STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rbsARibose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (501 aa)    
Predicted Functional Partners:
Ping_0342
PFAM: inner-membrane translocator; KEGG: ppr:PBPRB1558 putative ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.998
Ping_0343
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ppr:PBPRB1559 putative ribose ABC transporter, periplasmic D-ribose-binding protein.
 0.988
Ping_2789
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: bsu:BG10880 D-ribose transport system permease protein; TC 3.A.1.2.-.
 0.988
Ping_2807
PFAM: inner-membrane translocator; KEGG: mlo:mll3597 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.987
Ping_2788
Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: inner-membrane translocator; KEGG: gka:GK3227 ribose ABC transporter (permease); TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 0.985
Ping_1110
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pmu:PM1325 D-allose binding periplasmic protein; TC 3.A.1.2.-.
 
 0.972
Ping_2790
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; KEGG: atc:AGR_L_2023 bifunctional carbohydrate binding and transport protein; TC 3.A.1.2.-.
 
 0.972
Ping_2804
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sdy:SDY_4130 putative periplasmic ribose-binding protein of ABC transport system; TC 3.A.1.2.-.
 
 0.970
Ping_2806
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:bll5782 ABC transporter sugar-binding protein; TC 3.A.1.2.-.
 
 0.969
rbsD
Ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.934
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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