STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0386TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vpa:VP0317 putative thiamine ABC transporter, permease protein. (534 aa)    
Predicted Functional Partners:
Ping_0385
TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; thiamine ABC transporter, periplasmic binding protein; KEGG: vfi:VF0267 thiamine-binding protein.
 
 
 0.995
thiQ
ABC transporter for thiamin ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
 
 
 0.982
Ping_2746
ABC transporter periplasmic substrate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: vvu:VV21665 ABC-type Fe3+ transport system, periplasmic component.
 
  
 0.632
Ping_3007
KEGG: vfi:VF2151 iron(III)-binding protein.
  
  
 0.576
Ping_0715
KEGG: eca:ECA1027 hypothetical protein; Belongs to the UPF0325 family.
  
     0.526
Ping_2745
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vpa:VPA0238 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.469
Ping_3005
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0742 iron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.469
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.