STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0398PFAM: RDD domain containing protein; KEGG: ppr:PBPRA0490 hypothetical protein. (184 aa)    
Predicted Functional Partners:
Ping_2872
PFAM: cytochrome c1; KEGG: vfi:VF2217 cytochrome C1.
  
     0.751
Ping_3044
KEGG: vfi:VF0426 hypothetical protein.
  
     0.717
Ping_0210
PFAM: cytochrome c, class I; KEGG: vvy:VV0188 cytochrome c4.
  
     0.703
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit PetA; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.680
Ping_1072
KEGG: cps:CPS_3192 hypothetical protein.
  
     0.668
Ping_0170
PFAM: cytochrome c, class I; KEGG: vpa:VP0042 cytochrome c5.
  
     0.653
Ping_0095
Heat shock protein Hsp15; PFAM: RNA-binding S4 domain protein; KEGG: vfi:VF2476 heat shock protein 15; Belongs to the HSP15 family.
  
    0.626
Ping_0935
KEGG: vch:VC1438 hypothetical protein.
  
     0.612
Ping_2873
Fused ubiquinol-cytochrome c reductase and cytochrome b/b6; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
     0.593
Ping_1973
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO2935 short chain dehydrogenase.
  
     0.585
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.