STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0416PFAM: Endoribonuclease L-PSP; KEGG: bja:blr4467 hypothetical protein. (143 aa)    
Predicted Functional Partners:
Ping_2129
PFAM: Endoribonuclease L-PSP; KEGG: pcr:Pcryo_1816 Endoribonuclease L-PSP.
  
     0.774
Ping_0415
PFAM: extracellular solute-binding protein, family 3; KEGG: bxe:Bxe_B1064 ABC polar amino acid family transporter, periplasmic ligand binding protein; TC 3.A.1.3.-.
       0.636
Ping_0417
PFAM: Amidase; KEGG: mlo:mlr7070 glutamyl-tRNA(Gln) amidotransferase subunit A.
       0.625
Ping_0412
L-arginine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1463 polar amino acid transport system ATP-binding protein.
       0.524
Ping_0413
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1062 ABC polar amino acid family transporter, inner membrane subunit; TC 3.A.1.3.-.
       0.524
Ping_0414
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B1063 ABC polar amino acid family transporter, inner membrane subunit; TC 3.A.1.3.-.
       0.524
Ping_0419
KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family.
 
     0.520
Ping_0418
PFAM: regulatory protein, LysR; KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family.
       0.458
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.