STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0418PFAM: regulatory protein, LysR; KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family. (120 aa)    
Predicted Functional Partners:
Ping_0419
KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family.
     0.989
Ping_0417
PFAM: Amidase; KEGG: mlo:mlr7070 glutamyl-tRNA(Gln) amidotransferase subunit A.
 
     0.686
Ping_2379
PFAM: regulatory protein, LysR; KEGG: vfi:VF2051 transcriptional regulators, LysR family.
  
     0.680
Ping_2669
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vfi:VFA0053 transcriptional regulators, LysR family.
  
     0.652
Ping_2316
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ccr:CC1117 transcriptional regulator, LysR family.
  
     0.613
Ping_3529
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pat:Patl_1436 transcriptional regulator, LysR family.
  
     0.553
Ping_1689
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_4691 substrate-binding transcriptional regulator, LysR family.
  
     0.544
Ping_3351
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: cps:CPS_0934 transcriptional regulator, LysR family.
  
     0.539
Ping_1423
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ppr:PBPRA1412 putative transcriptional regulator, LysR family.
  
     0.535
Ping_0416
PFAM: Endoribonuclease L-PSP; KEGG: bja:blr4467 hypothetical protein.
       0.458
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.