STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0440PFAM: glycosyl transferase, group 1; KEGG: pat:Patl_4007 glycosyl transferase, group 1. (403 aa)    
Predicted Functional Partners:
Ping_0438
Transporter of NadC family protein; KEGG: mba:Mbar_B3744 hypothetical protein.
 
  
 0.855
Ping_0441
KEGG: mac:MA1063 capsular polysaccharide biosynthesis protein.
 
     0.809
Ping_0437
Hypothetical protein; KEGG: sme:SMb21237 putative enzyme, C-terminal domain similar to sulfotransferase protein.
 
     0.782
Ping_0442
PFAM: O-antigen polymerase.
  
  
 0.782
Ping_0457
PFAM: glycosyl transferase, group 1; KEGG: pfu:PF0788 glycosyl transferase.
  
     0.753
Ping_0439
Hypothetical protein.
       0.747
Ping_0456
PFAM: glycosyl transferase, group 1; KEGG: son:SO4681 glycosyl transferase, group 1 family protein.
  
     0.721
Ping_0461
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: pha:PSHAa1783 UDP-glucose lipid carrier transferase.
 
  
 0.660
Ping_0500
Hypothetical protein; KEGG: pat:Patl_2143 glycoside hydrolase, family 13-like.
   
 0.660
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.660
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.