STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0452PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rba:RB3239 probable D-tagatose 3-epimerase. (271 aa)    
Predicted Functional Partners:
Ping_0453
Hypothetical protein.
     0.974
Ping_0450
PFAM: FAD dependent oxidoreductase; KEGG: pub:SAR11_0547 D amino acid oxidase (DAO) family.
 
     0.956
Ping_0447
Dolichyl-phosphate beta-D-mannosyltransferase; KEGG: cgb:cg1672 polyprenol-phosphate-mannose synthase domain 1.
 
     0.916
Ping_0449
PFAM: glycosyl transferase, family 2; KEGG: mca:MCA2193 glycosyl transferase, group 2 family.
 
     0.857
Ping_0451
PFAM: small multidrug resistance protein; KEGG: dsy:DSY2566 hypothetical protein.
       0.817
Ping_0448
Hypothetical protein.
       0.777
Ping_0446
Hypothetical protein.
       0.606
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.