STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0487PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: dvu:DVU1638 hypothetical protein. (199 aa)    
Predicted Functional Partners:
Ping_2045
PFAM: Ferritin, Dps family protein; KEGG: pat:Patl_3841 ferritin and Dps; Belongs to the Dps family.
  
  
 0.642
Ping_0077
PFAM: Peptidoglycan-binding LysM; KEGG: sfr:Sfri_0025 peptidoglycan-binding LysM.
   
  
 0.617
Ping_1350
PFAM: peptidase M56, BlaR1; KEGG: noc:Noc_0291 hypothetical protein.
  
     0.566
Ping_2704
PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: sde:Sde_0733 putative serine protein kinase, PrkA.
   
    0.531
Ping_0486
Hypothetical protein.
       0.499
Ping_1776
KEGG: pol:Bpro_3282 hypothetical protein.
  
     0.460
Ping_0339
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
    0.405
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.