STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Ping_0503PTSINtr with GAF domain, PtsP; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: vpa:VP0521 phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family. (760 aa)    
Predicted Functional Partners:
Ping_2895
HPr-like nitrogen-regulatory protein NPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: vch:VC2533 phosphocarrier protein NPr.
  
 
 0.997
Ping_3551
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: ppr:PBPRA1573 putative PTS system, fructose-specific IIA/FPR component; TC 4.A.2.1.1.
 
 
 
 0.969
Ping_2441
KEGG: vvy:VV0976 phosphotransferase system IIA component; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; TC 4.A.1.1.1.
 
   
 0.935
Ping_2893
PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: vfi:VF0385 nitrogen regulatory IIA protein.
  
   
 0.849
Ping_2439
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: plu:plu1394 phosphocarrier protein HPr (histidine-containing protein).
  
 
 
 0.814
rppH
Nucleotide phosphate derivative pyrophosphohydrolase, MutT/nudix family protein; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
  
    0.777
Ping_3553
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: ppr:PBPRA1575 PTS system, fructose-specific IIBC component; TC 4.A.2.1.1; TC 4.A.2.1.1.
  
   
 0.487
Ping_2024
KEGG: mag:amb2165 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 
 0.456
Ping_0484
Multi-sensor histidine kinase with CHASE and PAS/PAC sensory domains; KEGG: neu:NE0049 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 
 0.430
Ping_0924
KEGG: vpa:VP0487 sensor histidine kinase FexB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 
 0.430
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.