STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0522Trehalose PTS system EIIBC or EIIBCA component; TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: ppr:PBPRA1224 putative PTS system, trehalose-specific IIBCcomponent; TC 4.A.1.2.4; TC 4.A.1.2.4. (486 aa)    
Predicted Functional Partners:
Ping_2441
KEGG: vvy:VV0976 phosphotransferase system IIA component; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain; TC 4.A.1.1.1.
 0.999
Ping_0523
KEGG: ppr:PBPRA1225 putative trehalose-6-phosphate hydrolase; TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
 
 
 0.978
Ping_2439
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: plu:plu1394 phosphocarrier protein HPr (histidine-containing protein).
  
 
 0.925
Ping_0974
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 0.920
Ping_0488
N-acetylglucosamine repressor, NagC; PFAM: ROK family protein; KEGG: plu:plu1315 N-acetylglucosamine repressor.
  
 
 0.871
Ping_1332
PFAM: ROK family protein; KEGG: vch:VC0270 ROK family protein.
  
 
 0.871
Ping_1702
N-acetylglucosamine kinase; PFAM: ROK family protein; KEGG: vch:VC0270 ROK family protein.
  
 
 0.871
Ping_3553
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: ppr:PBPRA1575 PTS system, fructose-specific IIBC component; TC 4.A.2.1.1; TC 4.A.2.1.1.
  
  
 0.831
Ping_2841
6-phospho-beta-glucosidase; PFAM: glycoside hydrolase, family 1; KEGG: eca:ECA1871 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.816
Ping_3312
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.711
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.