STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0545PFAM: extracellular solute-binding protein, family 5; KEGG: vvy:VVA0132 ABC-type dipeptide transport system, periplasmic component. (545 aa)    
Predicted Functional Partners:
Ping_0546
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0133 peptide ABC transporter, permease protein.
 
 
 0.940
Ping_0547
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VVA0134 peptide ABC transporter, permease protein.
 
 0.933
Ping_0549
ABC oligopeptide/dipeptide transporter ATP-binding protein; KEGG: vvy:VVA0136 ABC-type oligopeptide transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.917
Ping_0548
ABC oligopeptide/dipeptide transporter ATP-binding protein; KEGG: vvu:VV21294 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.911
Ping_2419
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4050 binding-protein-dependent transport systems inner membrane component.
 
 0.740
Ping_0563
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2517 dipeptide transport system permease protein DppB.
 
 0.728
dppC
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA1471 putative dipeptide ABC transporter (permease).
 
 0.727
Ping_0564
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF2516 dipeptide transport system permease protein DppC.
 
 0.703
Ping_2192
PFAM: extracellular solute-binding protein, family 5; KEGG: pat:Patl_3006 extracellular solute-binding protein, family 5.
  
  
  0.686
Ping_3159
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sil:SPO0705 oligopeptide ABC transporter, permease protein.
 
 
 0.676
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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