STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ping_0555PFAM: Carbohydrate-binding, CenC domain protein domain protein; KEGG: cps:CPS_3716 glycosyl hydrolase, family 16. (1426 aa)    
Predicted Functional Partners:
Ping_2959
Arylesterase; PFAM: lipolytic enzyme, G-D-S-L family; KEGG: vfi:VFA1044 acyl-CoA thioesterase I.
  
 
 0.751
Ping_1794
PFAM: glycosyl transferase, group 1; KEGG: cps:CPS_0439 hypothetical protein.
  
     0.636
Ping_0556
KEGG: vvy:VVA0139 hypothetical protein.
 
     0.634
Ping_0943
PFAM: Allergen V5/Tpx-1 family protein; KEGG: ana:all1882 unknown protein.
  
    0.614
Ping_0554
PFAM: glycoside hydrolase, family 16; KEGG: vvy:VVA0140 beta-glucanase.
 
   
 0.526
Ping_0500
Hypothetical protein; KEGG: pat:Patl_2143 glycoside hydrolase, family 13-like.
  
     0.484
Ping_0558
PFAM: glycoside hydrolase, family 16; KEGG: sde:Sde_3021 beta-glucanase/beta-glucan synthetase-like.
 
   
 0.478
Ping_0853
Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
  
     0.477
Ping_2470
KEGG: hch:HCH_06523 GDSL-lilke lipase/acylhydrolase family protein.
   
 
 0.440
Ping_0208
KEGG: pha:PSHAa2750 hypothetical protein.
  
  
 0.439
Your Current Organism:
Psychromonas ingrahamii
NCBI taxonomy Id: 357804
Other names: P. ingrahamii 37, Psychromonas ingrahamii 37, Psychromonas ingrahamii str. 37, Psychromonas ingrahamii strain 37, gas vacuolate str. 37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.